{ "cells": [ { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "#A helpful script for Exercise 3.4.8.\n", "\n", "#Here is the data for Exercise 3.4.8, in time/population pairs:\n", "data = [[0, 9.6], [1, 18.3], [2, 29], [3, 47.2], [4, 71.1], [5, 119.1], [6, 174.6], [7, 257.3], [8, 350.7], [9, 441], [10, 513.3], [11, 559.7], [12, 594.8], [13, 629.4], [14, 640.8], [15, 651.1], [16, 655.9], [17, 659.6]]\n", "N = len(data);" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "#A plot:\n", "plt1 = scatter_plot(data);\n", "show(plt1)" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "#Given that u(0) = 9.6, the solution to the logistic equation with intrinsic growth rate \"r\" and carrying capacity \"K\" is\n", "var('t K r');\n", "u(t,K,r) = K/(1+exp(-r*t)*(K/9.6-1)); #The model function to fit\n", "SS = function('SS')(K,r);\n", "SS(K,r) = add((u(data[i][0],K,r)-data[i][1])^2 for i in range(N));" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "#Now minimize SS(K,r) with respect to K and r." ] } ], "metadata": { "kernelspec": { "display_name": "SageMath 9.2", "language": "sage", "name": "sagemath" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.7.7" } }, "nbformat": 4, "nbformat_minor": 4 }